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proteograph

@preview

A package to visualise proteomics data.

v0.2.4
GPL-3.0-or-later

Package Information

Last Updated
Minimum Typst Version
0.13.1
Authors
Olivier Langella
Dependencies
@preview/fletcher:0.5.8@preview/lilaq:0.6.0@preview/tiptoe:0.4.0

1. Get the package

Download the package using the TPIX CLI:

tpix get @preview/proteograph:0.2.4

2. Import in your Typst file

Add this to your .typ file:

#import "@preview/proteograph:0.2.4": *

Version History

0.2.40.13.1
484522012829...
0.2.30.13.1
3d71580fc53c...
0.2.20.13.1
1887547fc6a4...
0.2.10.13.1
2b5e2c2bd96d...
0.2.00.13.1
e7959e203dbf...
0.1.00.13.1
669a0bcd942a...

proteograph

proteomics data visualization in Typst

Table of Contents

Introduction

The ProteoGraph package for Typst is a plotting library for proteomics based on Lilaq.
It currently defines functions to display MS2 annotated fragmentation spectra and eXtracted Ion Current (XIC).

MS2 annotated fragmentation spectra

Complete example of an annotated spectra with matched peaks

eXtracted Ion Current (XIC)

Representation of an eXtracted Ion Current (XIC)

Retention time alignment between 2 MS runs

Retention time alignment delta between 2MS runs across the chromatography

Protein sequence diagram showing highlighted subsequences

Representation of a protein sequence with highlighted segments

Documentation

Here proteograph-docs you have the reference documentation that describes the functions and parameters used in this package. (Generated with tidy)

License

GPLv3 License